BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015D06SP1|AL426838
(960 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1445 1873 0.0
>3x_Contig1445
Length = 8432
Score = 1873 bits (944), Expect = 0.0
Identities = 959/962 (99%), Gaps = 2/962 (0%)
Strand = Plus / Plus
Query: 1 atccagtgaa-tgcgcaaatgtaacaacagtgccaagcgttaccaacgaaatcatcgact 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5545 atccagtgaaatgcgcaaatgtaacaacagtgccaagcgttaccaacgaaatcatcgact 5604
Query: 60 taagctttatgattcaacataatactactaaaatcttcaaattttgtggaaaaattcctc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5605 taagctttatgattcaacataatactactaaaatcttcaaattttgtggaaaaattcctc 5664
Query: 120 cttcatccattgaaccttgaggctcatacatcatgatctgcatattgtttatagctagag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5665 cttcatccattgaaccttgaggctcatacatcatgatctgcatattgtttatagctagag 5724
Query: 180 cttgtttttagtaggaaaaaatgggataagggtcataaatgccaagaaaaaaagggtgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5725 cttgtttttagtaggaaaaaatgggataagggtcataaatgccaagaaaaaaagggtgcc 5784
Query: 240 attttacattaagtatacctcgaaagtataaacaaatcaacaatttagactttcatcatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5785 attttacattaagtatacctcgaaagtataaacaaatcaacaatttagactttcatcatc 5844
Query: 300 ttgaatcaaagtatcgtatgcgacgttattactcgtagttgccgacgtagaacggaaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5845 ttgaatcaaagtatcgtatgcgacgttattactcgtagttgccgacgtagaacggaaaaa 5904
Query: 360 aatcatagcttcacaaaaaaaagtgaaacagaaaaattgggtgtcactaataacttacat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5905 aatcatagcttcacaaaaaaaagtgaaacagaaaaattgggtgtcactaataacttacat 5964
Query: 420 gaaattgtcagggtatatcaaaatttctcctcttatgacttatggacgctcaaaatttcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5965 gaaattgtcagggtatatcaaaatttctcctcttatgacttatggacgctcaaaatttcc 6024
Query: 480 accaattcttgtctttttctggctgtccaggagaatcttattgcggtatgcggttgttga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6025 accaattcttgtctttttctggctgtccaggagaatcttattgcggtatgcggttgttga 6084
Query: 540 tatgatcttagttcgatgtagggttcatagaatatcaccttgtggaatcttcaaaaagaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6085 tatgatcttagttcgatgtagggttcatagaatatcaccttgtggaatcttcaaaaagaa 6144
Query: 600 aaattccagagcccttaatcgccaaaaaagccaagcttaaaaataatatagagtttacgg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6145 aaattccagagcccttaatcgccaaaaaagccaagcttaaaaataatatagagtttacgg 6204
Query: 660 tttttaaaaaaatttccacattggcgctagaaaaaccaaaagaagttcgaactttaaaac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6205 tttttaaaaaaatttccacattggcgctagaaaaaccaaaagaagttcgaactttaaaac 6264
Query: 720 gggcgatagacaggggattcgacagttttgatcttttttttaccttaggttatcaaataa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6265 gggcgatagacaggggattcgacagttttgatcttttttttaccttaggttatcaaataa 6324
Query: 780 aattattcaatgtacgttgcagcctcaccatcatcgatgcagcatgtattgtttaatgct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6325 aattattcaatgtacgttgcagcctcaccatcatcgatgcagcatgtattgtttaatgct 6384
Query: 840 tcaccagcagggtcgtaaaagcttgcccgttctcggaatggtttgtagataattttatgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6385 tcaccagcagggtcgtaaaagcttgcccgttctcggaatggtttgtagataattttatgc 6444
Query: 900 agggcaa-caaaaagaaaaaaaagatactttggrgaggactaaaccaaatcgttacaatt 958
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6445 agggcaaccaaaaagaaaaaaaagatactttggagaggactaaaccaaatcgttacaatt 6504
Query: 959 cc 960
||
Sbjct: 6505 cc 6506
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,443
Number of Sequences: 1807
Number of extensions: 10443
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)